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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015948759.1_cds_XP_016489917.1_80390
CDS Infomation

[gene=LOC107809757] [db_xref=GeneID:107809757] [protein=probable xyloglucan glycosyltransferase 6] [protein_id=XP_016489917.1] [location=join(11154..11852,12779..13087,13935..14225,14312..14425,17766..18404)] [gbkey=CDS]
Sequence

ATGTCTCGGCCGCCCAATCATGAGTTTCAGGAATGGTGGAACAAGCAAAGAGCCAGTGGC
AATGAGGATCTCCTCTCTTCTTCCTCCGAAAACCCTAGCTTTTTGACAGTTGAGATCCGT
AGCCCTACCGTTGATAAGAAGGAACGTACTCGCAGTGCTCGTCAACTTTCCTGGATTTAC
CTTCTCAAGTTTCAGCAAATTGCTAATTCAATCGCATTCCTCACGAACGGCTTCATTTCA
ATCGTTCGCACCGCCAATCGCCGAATCGTTACATCCAATTCGGCGCCTCATCGATCGGAT
TCTAAGCTCTATCGCGTAATTAAGGTGTTTTTAACAGTTTCAGTTATATTGTTAGTGTTT
GAGCTGGTTGCTTACTTCAGAGGATGGCATTTCAGTCCTCCGACTGTGGAATCGGCGTCG
GCGGAAGTGGTGGACTTAGTGGAGTACGTGTATGCCAATTGGTTAGACATTAGGGCTAAC
TATTTGGCGCCGCCATTACAGAGCTTGACCAATATGTGCATTGTTTTGTTCCTTATACAG
TCGGTAGATCGAGTGGTTCTTGTACTTGGTTGTTTTTGGATCAAGTTCCGACGTTTGAAA
CCTTTGGCGGAGATTGAGTACTCTGCTGATGTGGACAATCTGAATGCAGAGGATTATCCC
ATGGTGTTGCTTCAGATACCAATGTGCAATGAGAGGGAGGTGTACCAACAATCGATTGCA
GCAGTATGTGTCCAGGACTGGCCTAAGGAAAGAATGCTCGTACAAATTTTAGATGACTCG
GATGACTTGGGTGTTCAGGGACTTATCAAGGCTGAAGTACAAAAGTGGCAACACAAGGGT
GTGCACATTGTATATCGTCATCGTCTTATACGCACAGGCTATAAGGCAGGAAATCTCAAA
TCTGCGATGAGTTGTGACTACGTTAAAGATTATGAATTTGTAGCAATATTTGATGCAGAT
TTCCAGCCAGCACCAGATTTTCTTAAGAAAACTGTTCCCTACTTCAAGGGACATGATGAC
ATCGCTCTTGTCCAAACAAGGTGGTCTTTTGTGAACAAGGACGGGAATTTACTTACAAGA
TTGCAGAACATAAATCTTGCATTTCATTTTGAGGTTGAGCAACAAGTCAATGGATGGTTC
ATCAACTTCTTTGGCTTCAATGGCACTGCTGGTGTATGGAGAATCAAGGCCCTTGAAGAA
TGCGGAGGCTGGTTAGAGAGAACAACAGTTGAAGATATGGATATTGCTGTCCGTGCTCAC
CTTTGTGGATGGAAGTTTATCTATTTGAACGACGTTAAGTGCCTGTGTGAACTGCCGGAG
TCTTACGAGGCATATAAGAAGCAGCAACACCGGTGGCATTCTGGTCCAATGCAACTTTTT
CGCCTGTGTTTTTCCGACATATTGCGTTCAAAGGTTAGTTGGTTCAAGAAAGCCAATCTA
ATATTCCTTTTTTTCCTCTTGCGGAAGCTCATCCTACCATTTTATTCATTTACTCTCTTT
TGTATCATTCTCCCACTCACCATGTTCCTCCCAGAAGCTCAGTTACCAGCTTGGGTCGTC
TGCTATGTGCCTGGACTTATGTCCATCCTGAATATTCTTCCAGCTCCACAGTCATTCCCT
TTTATTGTACCCTACCTTTTATTTGAAAACACAATGTCTGTGACCAAATTCAATGCCATG
ATATCAGGGCTTTTCCAGTTAGGAAGTTCTTACGAGTGGATTGTTACGAAAAAGTTGGGA
AGATCATCAGAAGCTGATTTAGTTTCAATGGTGGAAAATGAATCTGAACCTTTGGTGGAG
AAGAGTACTGTCTCAAGATCCTCGTCAGAATCAGGCCTTGCTGAGCTTACCAAATTAGAG
ATGACCAAGAAAAAGGGAAAGAGGAAGAGAAACCGTTTATATAGAAAGGAGCTTGCTCTT
GCATTGATATTATTAACGGCCTCTGTCAGAAGCTTGTTATCTGCTCAAGGCATTCACTTC
TATTTCCTATTGTTTCAAGGGTTTACTTTCCTTGTTGTCGGTCTTGATTTGATTGGCGAA
CAGGTGAGTTGA

Peptide Sequence

PEP ID

XP_016489917.1
PEP Infomation

PREDICTED: probable xyloglucan glycosyltransferase 6 [Nicotiana tabacum]
Sequence

MSRPPNHEFQEWWNKQRASGNEDLLSSSSENPSFLTVEIRSPTVDKKERTRSARQLSWIY
LLKFQQIANSIAFLTNGFISIVRTANRRIVTSNSAPHRSDSKLYRVIKVFLTVSVILLVF
ELVAYFRGWHFSPPTVESASAEVVDLVEYVYANWLDIRANYLAPPLQSLTNMCIVLFLIQ
SVDRVVLVLGCFWIKFRRLKPLAEIEYSADVDNLNAEDYPMVLLQIPMCNEREVYQQSIA
AVCVQDWPKERMLVQILDDSDDLGVQGLIKAEVQKWQHKGVHIVYRHRLIRTGYKAGNLK
SAMSCDYVKDYEFVAIFDADFQPAPDFLKKTVPYFKGHDDIALVQTRWSFVNKDGNLLTR
LQNINLAFHFEVEQQVNGWFINFFGFNGTAGVWRIKALEECGGWLERTTVEDMDIAVRAH
LCGWKFIYLNDVKCLCELPESYEAYKKQQHRWHSGPMQLFRLCFSDILRSKVSWFKKANL
IFLFFLLRKLILPFYSFTLFCIILPLTMFLPEAQLPAWVVCYVPGLMSILNILPAPQSFP
FIVPYLLFENTMSVTKFNAMISGLFQLGSSYEWIVTKKLGRSSEADLVSMVENESEPLVE
KSTVSRSSSESGLAELTKLEMTKKKGKRKRNRLYRKELALALILLTASVRSLLSAQGIHF
YFLLFQGFTFLVVGLDLIGEQVS

Transcript Sequence

Gene sequence data has not been registered.